Cheap Flights from Manila to Tokyo Starting at $59

Helping travelers to find the best flight offers

Cheapest flights from Manila to Tokyo

Flaut.Travel was designed and developed by a team dedicated to making the process of searching, comparing and booking airline tickets as easy and convenient as possible. Our service helps travelers to find and buy the cheapest flights from Manila to Tokyo. We have connected more than 40 airlines and airline ticketing agencies to help you find the most suitable and affordable flight option.

Cheapest one way flight

$59

Cebu Pacific
Cebu Pacific
Direct flight
4h 45m
07/24/2025

The cheapest one-way flight from Manila to Tokyo departs on 07/24/2025, is operated by Cebu Pacific and costs $59

Cheapest round trip flight

$150

AirAsia Zest
AirAsia Zest
Direct flight
9h 25m
09/18/2025

The cheapest roundtrip flight from Manila to Tokyo departs on 09/18/2025, is operated by AirAsia Zest and costs $150

The fastest flight

4h 10m

Fastest flight from Manila to Tokyo takes 4h 10m

Direct flights

Every day

There are direct flights on this route 7 days a week: Su, Mo, Tu, We, Th, Fr, and Sa

Earliest flight

4:35 AM

Latest flight

2:50 AM

Average flight duration

4h 30m

Direct flights count

112

Distance

2995km

Timezone difference

1h

The distance between Manila and Tokyo is 2995km (1857 miles). The average flight duration is 4h 30m. There are 112 direct flights from Manila to Tokyo. The time difference between Manila and Tokyo is 1h . Flights from Manila begin at 4:35 AM. The latest flight from Manila departs at 2:50 AM.

Airfare from Manila to Tokyo by month

We carefully collect statistics on the search and pricing of airlines and, based on these data, we make an assumption about future prices. Thus, you can better understand which season is the cheapest to fly from Manila to Tokyo

July 2025
Lowest price
on average:
$59
April 2026
Highest price
on average:
$105
  • Avg Price

Airlines operating on route

Below you will find a list of airlines operating flights on the Manila — Tokyo route and the starting prices for flights of each specific airline on it.

Starting at $35

Starting at $69

Starting at $85

Direct Flights from Manila to Tokyo

A direct flight is the most convenient and comfortable way to fly from Manila to Tokyo, despite the fact that sometimes flights with transfers can cost significantly less.

Tokyo city image

ManilaTokyo

MNLTYO

06/07/2025

Departure date

Direct flight

ZIPAIR Tokyo

ZG96

Starting at $125

Tokyo city image

ManilaTokyo

MNLTYO

06/13/2025

Departure date

Direct flight

AirAsia Zest

Z2192

Starting at $107

Tokyo city image

ManilaTokyo

MNLTYO

06/13/2025

Departure date

Direct flight

Cebu Pacific

5J5054

Starting at $145

Tokyo city image

ManilaTokyo

MNLTYO

06/15/2025

Departure date

Direct flight

AirAsia Zest

Z2190

Starting at $123

Tokyo city image

ManilaTokyo

MNLTYO

06/16/2025

Departure date

Direct flight

Jetstar Japan

GK40

Starting at $93

Tokyo city image

ManilaTokyo

MNLTYO

06/17/2025

Departure date

Direct flight

AirAsia Zest

Z2190

Starting at $128

Tokyo city image

ManilaTokyo

MNLTYO

06/20/2025

Departure date

Direct flight

ZIPAIR Tokyo

ZG96

Starting at $155

Tokyo city image

ManilaTokyo

MNLTYO

06/23/2025

Departure date

Direct flight

Jetstar Japan

GK40

Starting at $108

Tokyo city image

ManilaTokyo

MNLTYO

06/26/2025

Departure date

Direct flight

Philippine Airlines

PR424

Starting at $162

Tokyo city image

ManilaTokyo

MNLTYO

06/27/2025

Departure date

Direct flight

ZIPAIR Tokyo

ZG96

Starting at $109

Schedule of direct flights from Manila to Tokyo

A direct flight is the easiest way to get to your destination. The following airlines operate non-stop flights from Manila to Tokyo:

Philippine Airlines

Philippine Airlines

Every day

Starting at $201

AirAsia Zest

AirAsia Zest

Every day

Starting at $70

Jetstar Japan

Jetstar Japan

Every day

Starting at $80

Manila airports overview

MNL
+2
Jetstar Japan
AirAsia Zest
Cebu Pacific
Airlines flying to this airport
$59
Starting at
$89
on average

Tokyo airports overview

NRT
ZIPAIR Tokyo
Jetstar Japan
AirAsia Zest
Cebu Pacific
Airlines flying to this airport
$59
Starting at
$86-312%
on average
HND
Philippine Airlines
Airlines flying to this airport
$353
Starting at
$353
on average

Frequently asked questions (FAQ)

Answers to questions about the route that travelers are most interested in.

How much is the cheapest flight ticket from Manila to Tokyo?

The cheapest flight ticket from Manila to Tokyo according to data for the last 48 hours costs $59

When is the best time to buy air tickets on the route Manila — Tokyo?

Often the best time to buy tickets from Manila to Tokyo is 2 months before departure.

When is the cheapest time of year to fly from Manila to Tokyo?

Based on statistics over the past years, the lowest prices for flights from Manila to Tokyo can be found flying in these months: July, August, June.

How long does it take to fly from Manila to Tokyo?

The fastest flights from Manila to Tokyo start from 4 hours 10 minutes in the air.

Which airline can fly direct from Manila to Tokyo?

The following airlines operate direct flights on the route Manila — Tokyo: ZIPAIR Tokyo, AirAsia Zest, Cebu Pacific

Special offers and sales on air tickets from Manila to Tokyo

We keep tight track on airlines' pre-holidays sales and other special offers occurences all the time to let you save maximum amount of funds while traveling to your family or just going out on vacation.

Alternative routes

BacolodTokyoCebu CityTokyoIloiloTokyoLaoagTokyoMasbateTokyoRoxas CityTokyoSan JoseTokyoTaclobanTokyoTuguegaraoTokyoNagaTokyoManilaFukushimaManilaShizuokaManilaYamagataManilaNiigataManilaKomatsuManilaMatsumotoManilaNagoyaManilaSendaiManilaToyama