Cheap Flights from Manila to Tokyo

Cheapest flights from Manila to Tokyo

Flaut.Travel was designed and developed by a team dedicated to making the process of searching, comparing and booking airline tickets as easy and convenient as possible. Our service helps travelers to find and buy the cheapest flights from Manila to Tokyo. We have connected more than 40 airlines and airline ticketing agencies to help you find the most suitable and affordable flight option.

Cheapest one way flight

$101

Cebu Pacific

Direct flight

4h 45m

11/24/2026

The cheapest one-way flight from Manila to Tokyo departs on 11/24/2026, is operated by Cebu Pacific and costs $101

Cheapest round trip flight

$186

Cebu Pacific

1 layover

14h 15m

11/05/2026

The cheapest roundtrip flight from Manila to Tokyo departs on 11/05/2026, is operated by Cebu Pacific and costs $186

The fastest flight

4h 30m

Fastest flight from Manila to Tokyo takes 4h 30m

Direct flights

Several times a week

There are direct flights on this route 5 days a week: Su, Tu, Th, Fr, and Sa

Earliest flight

4:35 AM

Latest flight

12:40 AM

Direct flights count

88

Distance

2995km

Timezone difference

1h

The distance between Manila and Tokyo is 2995km (1857 miles). There are 88 direct flights from Manila to Tokyo. The time difference between Manila and Tokyo is 1h. Flights from Manila begin at 4:35 AM. The latest flight from Manila departs at 12:40 AM

Remember that on average the ideal time to book flights is 2 months before departure!

Airfare from Manila to Tokyo by month

The minimum one-way ticket price from Manila to Tokyo is $97 (September 2026), while the maximum is $194 (June 2026). On average, a ticket costs $142–$146.

September 2026

Lowest price

on average:

$97

June 2026

Highest price

on average:

$194

Avg Price

Price dynamics

Flight costs on the Manila — Tokyo route are confidently going down. From June 2026 to March 2027, prices fell from $194 to $120 — a 38% decrease. A welcome trend for travelers.

Cheaper and more expensive periods

The most notable drop occurred from June 2026 to September 2026 — down 50%. The best period is September 2026–October 2026 (averaging $118), while the most expensive is June 2026–July 2026 ($172).

Best time to buy

Since prices are falling, there's no rush to buy. The most cost-effective travel period is September 2026–October 2026: savings compared to expensive months can reach up to 32%.

Price predictability

Monthly price variation is 18.6%. Choosing the right departure date can lead to significant savings on this route.

Airlines operating on route

The Manila — Tokyo route is served by a wide range of airlines: 4 in total, including Cebu Pacific, Jetstar Japan, Philippine Airlines, and Hong Kong Express Airways. Competition among carriers gives passengers the opportunity to find tickets at attractive fares — with prices starting from $101. Our service helps compare all available offers within seconds and choose the most convenient option. You can filter flights by price, departure time, or baggage rules to make your trip as comfortable as possible. With so many airlines, there’s always a chance to catch special promotions and save.

Cebu Pacific

starting at $101

Jetstar Japan

starting at $134

Philippine Airlines

starting at $140

Hong Kong Express Airways

starting at $189

Non-stop flights from Manila to Tokyo

A non-stop flight is the most convenient and comfortable way to fly from Manila to Tokyo, despite the fact that sometimes flights with transfers can cost significantly less.

Manila — Tokyo

MNL — TYO

11/24/2026

Departure

Direct flight

5J5056

starting at $101

Manila — Tokyo

MNL — TYO

03/12/2027

Departure

Direct flight

5J5056

starting at $109

Manila — Tokyo

MNL — TYO

01/23/2027

Departure

Direct flight

5J5056

starting at $119

Manila — Tokyo

MNL — TYO

03/05/2027

Departure

Direct flight

5J5056

starting at $120

Manila — Tokyo

MNL — TYO

09/10/2026

Departure

Direct flight

GK40

starting at $134

Manila — Tokyo

MNL — TYO

10/24/2026

Departure

Direct flight

5J5056

starting at $135

Manila — Tokyo

MNL — TYO

10/11/2026

Departure

Direct flight

PR432

starting at $140

Manila — Tokyo

MNL — TYO

10/03/2026

Departure

Direct flight

PR432

starting at $140

Manila — Tokyo

MNL — TYO

03/27/2027

Departure

Direct flight

5J5056

starting at $146

Manila — Tokyo

MNL — TYO

07/26/2026

Departure

Direct flight

5J5056

starting at $146

Schedule of direct flights from Manila to Tokyo

The only airline operating direct flights from Manila to Tokyo is Cebu Pacific. Flights operate every day.

Cebu Pacific

Every day

starting at $159

Manila airports overview

Ninoy Aquino International Airport

•

MNL

11km

Manila's primary international gateway, serving domestic and international routes with multiple terminals and extensive connectivity across Asia and beyond.

•

Tokyo airports overview

Haneda Airport

•

HND

18km

Major Tokyo hub handling extensive domestic flights and growing international services, with fast rail and monorail links to central Tokyo and convenient access to the greater Kanto region.

Narita International Airport

•

NRT

64km

Serving Tokyo and the Greater Kanto region, a major international and domestic hub with extensive connections and frequent rail and bus links to central Tokyo.

•

Frequently asked questions (FAQ)

Answers to questions about the route that travelers are most interested in.

What is the cheapest price for flights from Manila to Tokyo?

The cheapest flight ticket from Manila to Tokyo according to data for the last 48 hours costs $101

When is the best time to buy air tickets on the route Manila — Tokyo?

Often the best time to buy tickets from Manila to Tokyo is 2 months before departure.

When is the cheapest time of year to fly from Manila to Tokyo?

Based on statistics over the past years, the lowest prices for flights from Manila to Tokyo can be found flying in these months: September, March, January.

How long does it take to fly from Manila to Tokyo?

The fastest flights from Manila to Tokyo start from 4 hours 30 minutes in the air.

Which airline can fly direct from Manila to Tokyo?

The following airlines operate direct flights on the route Manila — Tokyo: Cebu Pacific, Jetstar Japan, Philippine Airlines

Special offers and sales on air tickets from Manila to Tokyo

We keep tight track on airlines' pre-holidays sales and other special offers occurences all the time to let you save maximum amount of funds while traveling to your family or just going out on vacation.

Manila — Tokyo

октябрь 10

Cebu Pacific

$95

Alternative routes

Bacolod ➜ Tokyo•Cebu City ➜ Tokyo•Iloilo ➜ Tokyo•Laoag ➜ Tokyo•Masbate ➜ Tokyo•Roxas City ➜ Tokyo•San Jose ➜ Tokyo•Tacloban ➜ Tokyo•Tuguegarao ➜ Tokyo•Naga ➜ Tokyo•Manila ➜ Fukushima•Manila ➜ Shizuoka•Manila ➜ Yamagata•Manila ➜ Niigata•Manila ➜ Komatsu•Manila ➜ Matsumoto•Manila ➜ Nagoya•Manila ➜ Sendai•Manila ➜ Toyama

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Cheapest one way flight

$101

Cebu Pacific

Direct flight

4h 45m

11/24/2026

The cheapest one-way flight from Manila to Tokyo departs on 11/24/2026, is operated by Cebu Pacific and costs $101

Cheapest round trip flight

$186

Cebu Pacific

1 layover

14h 15m

11/05/2026

The cheapest roundtrip flight from Manila to Tokyo departs on 11/05/2026, is operated by Cebu Pacific and costs $186

The fastest flight