Cheap Flights from Manila to Kota Kinabalu Starting at $56

The Manila — Kota Kinabalu route is served by a wide range of airlines: 4 in total, including AirAsia Zest, Cebu Pacific, AirAsia, and Scoot. Competition among carriers gives passengers the opportunity to find tickets at attractive fares — with prices starting from $56. Our service helps compare all available offers within seconds and choose the most convenient option. You can filter flights by price, departure time, or baggage rules to make your trip as comfortable as possible. With so many airlines, there’s always a chance to catch special promotions and save.

Looking for direct flights from Manila to Kota Kinabalu? Look no further! We've got you covered. Fly hassle-free from the Philippines to Malaysia with direct flights available for this route. Whether you're planning a business trip or a relaxing vacation, booking your air tickets just became easier. No need to worry about layovers or transfers. Sit back, relax, and enjoy a smooth and convenient journey. If, however, you can't find direct flights for your preferred dates, fret not! You can still reach Kota Kinabalu by choosing alternative routes. One option is to transit in Kuala Lumpur, Malaysia's vibrant capital, before catching your connecting flight to Kota Kinabalu. Another possibility is to transit in Singapore, a bustling city known for its efficient airport and diverse attractions. Both options allow you to explore additional destinations while en route to Kota Kinabalu. Start your air ticket search now and experience a seamless journey from Manila to Kota Kinabalu with our user-friendly website.

The minimum one-way ticket price from Manila to Kota Kinabalu is $57 (February 2026), while the maximum is $130 (March 2026). On average, a ticket costs $74–$123.