Cheap Flights from Manila to Kota Kinabalu

Cheapest flights from Manila to Kota Kinabalu

Flaut.Travel was designed and developed by a team dedicated to making the process of searching, comparing and booking airline tickets as easy and convenient as possible. Our service helps travelers to find and buy the cheapest flights from Manila to Kota Kinabalu. We have connected more than 40 airlines and airline ticketing agencies to help you find the most suitable and affordable flight option.

Cheapest one way flight

$73

AirAsia Zest

Direct flight

2h 10m

07/27/2026

The cheapest one-way flight from Manila to Kota Kinabalu departs on 07/27/2026, is operated by AirAsia Zest and costs $73

Cheapest round trip flight

—

There is no information about the cheapest roundtrip flight from Manila to Kota Kinabalu

The fastest flight

2h 10m

Fastest flight from Manila to Kota Kinabalu takes 2h 10m

Direct flights

Several times a week

There are direct flights on this route 2 days a week: Su and Mo

Earliest flight

11:10 PM

Latest flight

11:10 PM

Average flight duration

2h 10m

Direct flights count

3

Distance

1105km

Timezone difference

0h

The distance between Manila and Kota Kinabalu is 1105km (685 miles). The average flight duration is 2h 10m. There are 3 direct flights from Manila to Kota Kinabalu. Manila and Kota Kinabalu are in the same time zone. Flights from Manila begin at 11:10 PM. The latest flight from Manila departs at 11:10 PM

Remember that on average the ideal time to book flights is 2 months before departure!

Airfare from Manila to Kota Kinabalu by month

The minimum one-way ticket price from Manila to Kota Kinabalu is $78 (January 2027), while the maximum is $201 (June 2027). On average, a ticket costs $143–$359.

January 2027

Lowest price

on average:

$78

June 2027

Highest price

on average:

$201

Avg Price

Price dynamics

Tickets from Manila to Kota Kinabalu are getting more expensive each month. From July 2026 to June 2027, the increase reached 153%, with prices now at $201. It's unlikely to get cheaper than the current level.

Cheaper and more expensive periods

The most significant price increase was from July 2026 to December 2026 — up 139%. The best time to fly is July 2026–August 2026, when the average price is $124. In August 2026–December 2026, tickets cost around $179.

Best time to buy

Given the rising prices, it's best not to delay your purchase. Flying in July 2026–August 2026 can save you up to 31% compared to the most expensive months.

Price predictability

Price variation across months on this route is 37.5%. Your choice of departure month significantly affects the total flight cost.

Airlines operating on route

The route Manila — Kota Kinabalu is served by several airlines: AirAsia Zest and Scoot. This gives passengers more freedom in choosing flights. You can consider not only the price but also schedules, baggage policies, and onboard service. Our service compares all offers so you can find tickets from $73 and choose the most convenient option. Thanks to airline competition, you may also find promotional fares or special offers, helping you save even more. Plan your trip in advance and choose the best flights without overpaying.

AirAsia Zest

starting at $73

Scoot

starting at $126

Non-stop flights from Manila to Kota Kinabalu

A non-stop flight is the most convenient and comfortable way to fly from Manila to Kota Kinabalu, despite the fact that sometimes flights with transfers can cost significantly less.

Manila — Kota Kinabalu

MNL — BKI

01/03/2027

Departure

Direct flight

Z2501

starting at $126

Manila — Kota Kinabalu

MNL — BKI

07/26/2026

Departure

Direct flight

Z2501

starting at $100

Manila — Kota Kinabalu

MNL — BKI

07/27/2026

Departure

Direct flight

Z2501

starting at $73

Schedule of direct flights from Manila to Kota Kinabalu

There are most likely no direct flights on the Manila — Kota Kinabalu route

Manila airports overview

Ninoy Aquino International Airport

•

MNL

11km

Manila's primary international gateway, serving domestic and international routes with multiple terminals and extensive connectivity across Asia and beyond.

•

Kota Kinabalu airports overview

Kota Kinabalu International Airport

•

BKI

Gateway to Kota Kinabalu and Sabah, Malaysia, serving domestic and regional international flights; convenient for access to Borneo’s rainforests and island resorts.

•

Frequently asked questions (FAQ)

Answers to questions about the route that travelers are most interested in.

What is the cheapest price for flights from Manila to Kota Kinabalu?

The cheapest flight ticket from Manila to Kota Kinabalu according to data for the last 48 hours costs $73

When is the best time to buy air tickets on the route Manila — Kota Kinabalu?

Often the best time to buy tickets from Manila to Kota Kinabalu is 2 months before departure.

When is the cheapest time of year to fly from Manila to Kota Kinabalu?

Based on statistics over the past years, the lowest prices for flights from Manila to Kota Kinabalu can be found flying in these months: January, July, August.

How long does it take to fly from Manila to Kota Kinabalu?

The fastest flights from Manila to Kota Kinabalu start from 2 hours 10 minutes in the air.

Which airline can fly direct from Manila to Kota Kinabalu?

The following airlines operate direct flights on the route Manila — Kota Kinabalu: AirAsia Zest

Special offers and sales on air tickets from Manila to Kota Kinabalu

We keep tight track on airlines' pre-holidays sales and other special offers occurences all the time to let you save maximum amount of funds while traveling to your family or just going out on vacation.

We couldn't find any special offers for flights from Manila to Kota Kinabalu

Alternative routes

•••••••••••••••••••

Cheapest one way flight

$73

AirAsia Zest

Direct flight

2h 10m

07/27/2026

The cheapest one-way flight from Manila to Kota Kinabalu departs on 07/27/2026, is operated by AirAsia Zest and costs $73

Cheapest round trip flight

—

There is no information about the cheapest roundtrip flight from Manila to Kota Kinabalu

The fastest flight

2h 10m

Fastest flight from Manila to Kota Kinabalu takes 2h 10m

Direct flights

Several times a week

There are direct flights on this route 2 days a week: Su and Mo

Earliest flight

11:10 PM

Latest flight

11:10 PM

Average flight duration

2h 10m

Direct flights count

3

Distance

1105km

Timezone difference

0h

Price dynamics

Cheaper and more expensive periods

Best time to buy

Given the rising prices, it's best not to delay your purchase. Flying in July 2026–August 2026 can save you up to 31% compared to the most expensive months.

Price predictability

Price variation across months on this route is 37.5%. Your choice of departure month significantly affects the total flight cost.

Manila — Kota Kinabalu

MNL — BKI

01/03/2027

Departure

Direct flight

Z2501

starting at $126

Manila — Kota Kinabalu

MNL — BKI

07/26/2026

Departure

Direct flight

Z2501

starting at $100

Manila — Kota Kinabalu

MNL — BKI

07/27/2026

Departure

Direct flight

Z2501

starting at $73

What is the cheapest price for flights from Manila to Kota Kinabalu?

The cheapest flight ticket from Manila to Kota Kinabalu according to data for the last 48 hours costs $73

When is the best time to buy air tickets on the route Manila — Kota Kinabalu?

Often the best time to buy tickets from Manila to Kota Kinabalu is 2 months before departure.

When is the cheapest time of year to fly from Manila to Kota Kinabalu?

Based on statistics over the past years, the lowest prices for flights from Manila to Kota Kinabalu can be found flying in these months: January, July, August.

How long does it take to fly from Manila to Kota Kinabalu?

The fastest flights from Manila to Kota Kinabalu start from 2 hours 10 minutes in the air.

Which airline can fly direct from Manila to Kota Kinabalu?

The following airlines operate direct flights on the route Manila — Kota Kinabalu: AirAsia Zest

Cheap Flights from Manila to Kota Kinabalu — $73

Compare airlines, prices, and flight durations for your trip

Cheapest flights from Manila to Kota Kinabalu

Cheapest one way flight

$73

AirAsia Zest

Direct flight

2h 10m

07/27/2026

Cheapest round trip flight

—

—

—

—

—

The fastest flight

2h 10m

Direct flights

Several times a week

Earliest flight

11:10 PM

Latest flight

11:10 PM

Average flight duration

2h 10m

Direct flights count

3

Distance

1105km

Timezone difference

0h

Airfare from Manila to Kota Kinabalu by month

January 2027

on average:

$78

June 2027

on average:

$201

Price dynamics

Cheaper and more expensive periods

Best time to buy

Price predictability

Airlines operating on route

Non-stop flights from Manila to Kota Kinabalu

Schedule of direct flights from Manila to Kota Kinabalu

Manila airports overview

Ninoy Aquino International Airport

Kota Kinabalu airports overview

Kota Kinabalu International Airport

Frequently asked questions (FAQ)

Special offers and sales on air tickets from Manila to Kota Kinabalu

Alternative routes

Cheapest one way flight

$73

AirAsia Zest

Direct flight

2h 10m

07/27/2026

Cheapest round trip flight

—

—

—

—

—

The fastest flight

2h 10m

Direct flights

Several times a week

Earliest flight

11:10 PM

Latest flight

11:10 PM

Average flight duration

2h 10m

Direct flights count

3

Distance

1105km

Timezone difference

0h